- 3rd Edition home
- Resources for Teachers
- The book's webpage at Wiley
- Part I : Bioinformatics : Analyzing DNA, RNA, and Protein Sequences
- Part II: Functional Genomics: Bioinformatics from DNA to RNA to Protein
- Chapter 8: The Eukaryotic Chromosome
- Chapter 9: DNA Analysis: Microarrays and Next Generation Sequencing
- Chapter 10: Bioinformatic Approaches to RNA
- Chapter 11: RNA Analysis: Microarrays and Next Generation Sequencing
- Chapter 12: Proteomics
- Chapter 13: Protein Structure
- Chapter 14: Functional Genomics
- Part III: Genomics
- Second edition
Bioinformatics and Functional Genomics 3rd Edition
Chapter 2 WebLinks 2.11-2.20
This web page offers the web documents that are referred to in Chapter 2 of the book, as well as various resources. In this chapter we introduce GenBank and its companion databases, as well as the National Center for Biotechnology Information (NCBI) and the European Bioinformatics Institute (EBI). We introduce ways to access a variety of information (including Entrez at NCBI, protein databases such as UniProt, genome browsers such as those at Ensembl and UCSC, and biomedical literature via PubMed).
WebLink | Site | URL |
2.11 | Genome Survey Sequences (GSS) at NCBI | http://www.ncbi.nlm.nih.gov/nucgss |
2.12 | HTGS home page | http://www.ncbi.nlm.nih.gov/HTGS/ |
2.13 | UniGene HBB entry | http://www.ncbi.nlm.nih.gov/UniGene/clust.cgi?UGID=914190&TAXID=9606&SEARCH=hbb |
2.14 | Expressed sequence tag AA970968.1 | http://www.ncbi.nlm.nih.gov/nucest/3146258 |
2.15 | EBI protein databases | http://www.ebi.ac.uk/services/proteins |
2.16 | PIR database | http://pir.georgetown.edu/ |
2.17 | UniProt | http://www.uniprot.org |
2.18 | UniProt from EBI | http://www.ebi.ac.uk/uniprot/ |
2.19 | UniProt from ExPASy | http://web.expasy.org/docs/swiss-prot_guideline.html |
2.20 | UniProt statistics | ftp://ftp.uniprot.org/pub/databases/uniprot/relnotes.txt |